Real structure
Manuscript 1
Under ReviewBioscience
Research
Notes from the work itself.
Publications and technical notes from IndiskaAI, each listed with its current status. Manuscripts under review are labelled as such.
Research log
No research published yet.
Technical notes and reports will be listed here with their status and links once they are ready. To hear about them, email us.
Manuscripts
Our publications.
Research at the intersection of computational biology, antibody engineering and AI-assisted drug discovery.
- Real structureManuscript 2Under ReviewStructure prediction
Benchmarking Ab structure prediction models using Intrachain Interaction Analysis
- Real structureManuscript 3Structure prediction
Benchmarked Antibody Structure Prediction Models: Accuracy, Stereochemistry and Superposition Sensitivity
- Manuscript 4AcceptedAntibody developability
Antibody Developability: A Critical Determinant in Therapeutic Antibody Advancement
- IllustrativeManuscript 5Under ReviewOncology sequencing
Rescuing Filtered Variants in Targeted Oncopanel Sequencing: Rule-Based and Machine-Learning Approaches
Figures are structure renders, live views of public PDB entries and schematic illustrations of each topic, not figures from the papers themselves. Journal, DOI and publication links appear here once confirmed.
Technical infrastructure
The hardware behind the work.
The computing and software behind our analyses, listed so you can see what runs where.
Compute
NVIDIA A6000 / A5000
GPU workstations used for simulation and structure-modelling jobs.
Simulation
OpenMM · GROMACS
Molecular-dynamics runs used to examine how interactions behave over simulated time.
Stack
PyTorch · JAX · CUDA
Frameworks used for model inference and analysis.